name: bed12
version: 0.0.2
output_asset_class: bed
description: |
  Genomic feature annotations in BED12 format.
input_files:
  bedgz:
    description: Genomic feature annotations in gzipped Browser Extensible Data (BED12) format
input_assets: {}
input_params: {}
docker_image: null
command_templates:
  - cp {{values.files["bedgz"]}} {{values.output_folder}}/{{values.genome_digest}}.bed.gz
default_asset: "default"

tags:
- annotation
- bed
outputs:
- pattern: '*.bed.gz'
  description: BED12 annotation file (gzipped)
test:
  commands:
  - test -f {output_dir}/{genome}.bed.gz
resources:
  memory: 1GB
  disk: 2GB
  time: 10m
metadata:
  author: nsheff
  created: '2026-05-20'
  license: BSD-2-Clause